PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512963.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Trihelix
Protein Properties Length: 384aa    MW: 44673.6 Da    PI: 4.2736
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.21.1e-13136223186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                     +W ++ + +L+e+  e+  +l+r++l+   W ev++k+ +e ++er+  qC++ ++++++rykk+k ++ +     ss ++p+f++++
  XP_004512963.1 136 EWNEHGTFVLLEIWGEKFLQLGRNSLRSEEWHEVAEKVsEELKVERNVSQCRSVLDKVKRRYKKEKSRMDEMgLGVSSCKWPFFKKMD 223
                     5*************************************8889*************************9999856778889*******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.3E-17135225No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MDDMEDDARY PSKGYPLRRK NPNLRQKHPI RTLQYHHPPT LRYNDPDHNN NNIEEDYEDE  60
EPEEFDDYNV DEEDEDGIEN GYIGNFDENE GFIRKKRKIR SGSGSSSVSN YDLMPRGKFS  120
YVNRGSGGGS SSVSEEWNEH GTFVLLEIWG EKFLQLGRNS LRSEEWHEVA EKVSEELKVE  180
RNVSQCRSVL DKVKRRYKKE KSRMDEMGLG VSSCKWPFFK KMDMLMSSSA RQEYGLACGV  240
DSGEFVFMNT RVYLNRSNGF DEMRDSPGES ETSEDDEDDD EDDDFDGVRG GGGDEEEDEV  300
DKEEEEASYR VLADSIQKFG KIYEKIENTK RQQMMELEKM RMDFNRELEL QKKQILERTQ  360
AEISKMQEVG DDDDTDTSAD NLSE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2023411e-130AC202341.28 Medicago truncatula clone mth2-24i7, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512963.10.0PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A072UC931e-165A0A072UC93_MEDTR; Myb/SANT-like DNA-binding domain protein
STRINGGLYMA09G32130.21e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-78Trihelix family protein